BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006D12LP1|AL425536
(1047 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig731 1871 0.0
>3x_Contig731
Length = 3248
Score = 1871 bits (938), Expect = 0.0
Identities = 964/974 (98%), Gaps = 2/974 (0%)
Strand = Plus / Minus
Query: 1 cccacagcccagttttacacctgntctgcctgaatcggctcttatatacatctaattttc 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 2002 cccacagcccagttttacacctg-tctgcctgaatcggctcttatatacatctaattttc 1944
Query: 61 aattttgccagattgaaaaaaaaatcgaaggctgtttatttctgactgagaatacaccct 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1943 aattttgccagattgaaaaaaaaatcgaaggctgtgtatttctgactgagaatacaccct 1884
Query: 121 cgacgttataagtcagtttagatacaagcatttcattcattacggatccaaaaattacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1883 cgacgttataagtcagtttagatacaagcatttcattcattacggatccaaaaattacac 1824
Query: 181 atctacggtacttacatatcagatacatatctaaacgcattttctggcaaccaatccgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1823 atctacggtacttacatatcagatacatatctaaacgcattttctggcaaccaatccgaa 1764
Query: 241 tatttgaagaaaaataatctcctttktttcttaacatttcaactgaaaccttctagcgta 300
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1763 tatttgaagaaaaataatctcctttgtttcttaacatttcaactgaaaccttctagcgta 1704
Query: 301 actgataggtctctctccttacctattcaattcattccagtagtacgtcaagtacgcatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1703 actgataggtctctctccttacctattcaattcattccagtagtacgtcaagtacgcatt 1644
Query: 361 ggatggcctaamagtgcctgattgtgtgtacatgcgtaagtgtttggctaatagttctta 420
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1643 ggatggcctaaaagtgcctgattgtgtgtacatgcgtaagtgtttggctaatagttctta 1584
Query: 421 gcgaaaaaaaatacktccccataaacgacgaatattctgccatttcaggcaaatagctgc 480
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1583 gcgaaaaaaaatacttccccataaacgacgaatattctgccatttcaggcaaatagctgc 1524
Query: 481 ccttatatttgtkaacaacttggtaagcktaatttccaatttaagtgtgatgaacctctc 540
|||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 1523 ccttatatttgttaacaacttggtaagcttaatttccaatttaagtgttatgaacctctc 1464
Query: 541 tcctggtccagtcttaaaccctctaatgtatcctacatcgctaaagccatttcagcttag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1463 tcctggtccagtcttaaaccctctaatgtatcctacatcgctaaagccatttcagcttag 1404
Query: 601 aaagtgtaaaagacaataccttgatggaaataacgacaagttgtacagaaagtagcgcac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1403 aaagtgtaaaagacaataccttgatggaaataacgacaagttgtacagaaagtagcgcac 1344
Query: 661 agcgtcttgttttaacggcagaatatatatatacagtttaatctcataacaaccgcagtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1343 agcgtcttgttttaacggcagaatatatatatacagtttaatctcataacaaccgcagtt 1284
Query: 721 gtccccaaataccttattgttcccatctctagtgatgaaaacttttcttcatcattactg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1283 gtccccaaataccttattgttcccatctctagtgatgaaaacttttcttcatcattactg 1224
Query: 781 atgggcaacatacatgaaaaaaaattgtaaaatctctaattcatcaacttacctttacca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1223 atgggcaacatacatgaaaaaaaattgtaaaatctctaattcatcaacttacctttacca 1164
Query: 841 gcgaataattcaacgacaggcaactctatctcattctatttcctaatccaaaatcgtgta 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1163 gcgaataattcaacgacaggcaactctatctcattctatttcctaatccaaaatcgtgta 1104
Query: 901 ttaactgaacttggtattcatatcttaataatawaatatgtttt-atttttctatttttc 959
||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 1103 ttaactgaacttggtattcatatcttaataatataatatgttttaatttttctatttttc 1044
Query: 960 tttgaagtttgtaa 973
||||||||||||||
Sbjct: 1043 tttgaagtttgtaa 1030
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,952
Number of Sequences: 1807
Number of extensions: 10952
Number of successful extensions: 62
Number of sequences better than 1.0e-20: 1
length of query: 1047
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1031
effective length of database: 10,329,639
effective search space: 10649857809
effective search space used: 10649857809
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)